scholarly journals Corrigendum: Populus trichocarpa PtNF-YA9, a Multifunctional Transcription Factor, Regulates Seed Germination, Abiotic Stress, Plant Growth and Development in Arabidopsis

2018 ◽  
Vol 9 ◽  
Author(s):  
Conglong Lian ◽  
Qing Li ◽  
Kun Yao ◽  
Ying Zhang ◽  
Sen Meng ◽  
...  
BMC Genomics ◽  
2019 ◽  
Vol 20 (1) ◽  
Author(s):  
Intikhab Alam ◽  
Cui-Cui Liu ◽  
Hong-Liu Ge ◽  
Khadija Batool ◽  
Yan-Qing Yang ◽  
...  

Abstract Background Plant homeodomain (PHD) finger proteins are widely present in all eukaryotes and play important roles in chromatin remodeling and transcriptional regulation. The PHD finger can specifically bind a number of histone modifications as an “epigenome reader”, and mediate the activation or repression of underlying genes. Many PHD finger genes have been characterized in animals, but only few studies were conducted on plant PHD finger genes to this day. Brassica rapa (AA, 2n = 20) is an economically important vegetal, oilseed and fodder crop, and also a good model crop for functional and evolutionary studies of important gene families among Brassica species due to its close relationship to Arabidopsis thaliana. Results We identified a total of 145 putative PHD finger proteins containing 233 PHD domains from the current version of B. rapa genome database. Gene ontology analysis showed that 67.7% of them were predicted to be located in nucleus, and 91.3% were predicted to be involved in protein binding activity. Phylogenetic, gene structure, and additional domain analyses clustered them into different groups and subgroups, reflecting their diverse functional roles during plant growth and development. Chromosomal location analysis showed that they were unevenly distributed on the 10 B. rapa chromosomes. Expression analysis from RNA-Seq data showed that 55.7% of them were constitutively expressed in all the tested tissues or organs with relatively higher expression levels reflecting their important housekeeping roles in plant growth and development, while several other members were identified as preferentially expressed in specific tissues or organs. Expression analysis of a subset of 18 B. rapa PHD finger genes under drought and salt stresses showed that all these tested members were responsive to the two abiotic stress treatments. Conclusions Our results reveal that the PHD finger genes play diverse roles in plant growth and development, and can serve as a source of candidate genes for genetic engineering and improvement of Brassica crops against abiotic stresses. This study provides valuable information and lays the foundation for further functional determination of PHD finger genes across the Brassica species.


2017 ◽  
Vol 42 (3) ◽  
Author(s):  
Qiaoyun Weng ◽  
Jinhui Song ◽  
Hailian Ma ◽  
Jincheng Yuan ◽  
Yanmin Zhao ◽  
...  

AbstractObjectiveABI3 is a B3 domain transcription factor existed in various plant species. Studies showed that ABI3 play important role in plant growth and development.MethodsTheResultsOne gene contained B3 domain was isolated from maize, designated asConclusionA new gene contained a B3 domain was cloned and named as


2017 ◽  
Vol 61 (6) ◽  
pp. 675-685 ◽  
Author(s):  
Henri Batoko ◽  
Yasin Dagdas ◽  
Frantisek Baluska ◽  
Agnieszka Sirko

Autophagy is an essential catabolic pathway and is activated by various endogenous and exogenous stimuli. In particular, autophagy is required to allow sessile organisms such as plants to cope with biotic or abiotic stress conditions. It is thought that these various environmental signaling pathways are somehow integrated with autophagy signaling. However, the molecular mechanisms of plant autophagy signaling are not well understood, leaving a big gap of knowledge as a barrier to being able to manipulate this important pathway to improve plant growth and development. In this review, we discuss possible regulatory mechanisms at the core of plant autophagy signaling.


Author(s):  
S.V. Maltsev ◽  
D.V. Abrosimov ◽  
O.V. Abashkin

Отражены результаты исследований влияния фитогормона этилена и гамма-облучения 60Co на интенсивность прорастания семенных клубней картофеля, рост и развитие растений, число стеблей и клубней на куст, урожайность и структуру урожая. Обработка семенных клубней картофеля этиленом позволила увеличить общую урожайность картофеля в зависимости от сорта, района выращивания и применения орошения на 9,9–19,0% (1,2–6,4 т/га).The article reveals the results of studies the phytohormone ethylene and gamma-irradiation (60Co) and its influence on seed germination, plant growth and development, number of stems and tubers per plant, yield and structure of yield. Treatment of seed potato tubers with ethylene allowed to increase the total yield of potatoes depending on the variety, area of cultivation and application of irrigation by 9.9–19.0% (1.2–6.4 t/ha).


2021 ◽  
Vol 14 (2) ◽  
pp. 5-18
Author(s):  
I. V. Kosakivska ◽  

Background. Gibberellins (GAs), a class of diterpenoid phytohormones, play an important role in regulation of plant growth and development. Among more than 130 different gibberellin molecules, only a few are bioactive. GA1, GA3, GA4, and GA7 regulate plant growth through promotion the degradation of the DELLA proteins, a family of nuclear growth repressors – negative regulator of GAs signaling. Recent studies on GAs biosynthesis, metabolism, transport, and signaling, as well as crosstalk with other phytohormones and environment have achieved great progress thanks to molecular genetics and functional genomics. Aim. In this review, we focused on the role of GAs in regulation of plant gtowth in abiotic stress conditions. Results. We represented a key information on GAs biosynthesis, signaling and functional activity; summarized current understanding of the crosstalk between GAs and auxin, cytokinin, abscisic acid and other hormones and what is the role of GAs in regulation of adaptation to drought, salinization, high and low temperature conditions, and heavy metal pollution. We emphasize that the effects of GAs depend primarily on the strength and duration of stress and the phase of ontogenesis and tolerance of the plant. By changing the intensity of biosynthesis, the pattern of the distribution and signaling of GAs, plants are able to regulate resistance to abiotic stress, increase viability and even avoid stress. The issues of using retardants – inhibitors of GAs biosynthesis to study the functional activity of hormones under abiotic stresses were discussed. Special attention was focused on the use of exogenous GAs for pre-sowing priming of seeds and foliar treatment of plants. Conclusion. Further study of the role of gibberellins in the acquisition of stress resistance would contribute to the development of biotechnology of exogenous use of the hormone to improve growth and increase plant yields under adverse environmental conditions.


Author(s):  
Rafaqat Ali Gill ◽  
Sunny Ahmar ◽  
Basharat Ali ◽  
Muhammad Hamzah Saleem ◽  
Muhammad Umar Khan ◽  
...  

Membrane transporters (MTs) are mainly localized at the plasma membrane (PM), tonoplast and vacuolar membrane (VM) of cells in all plant organs. Their work is to maintain the cellular homeostasis by controlling ionic movements across PM channels from roots to upper plant parts, xylem loading and remobilization of sugar molecules from photosynthesis tissues in the leaf (source) to roots, stem and seeds (sink) via phloem loading. The plant’s whole source-to-sink relationship is regulated by multiple transporting proteins in a highly sophisticated manner and driven based on different stages of plant growth and development (PG&D), and environmental changes. The MTs play a pivotal role in PG&D in terms of increased plant height, branches/tiller numbers, enhanced numbers, length and filled panicles per plant, seed yield and grain quality. Dynamic climatic changes disturbed the ionic balance (salt, drought and heavy metals) and sugar supply (cold and heat stress). Due to poor selectivity, some of the MTs also uptake toxic elements in the roots that negatively impact on PG&D, later on also exported to upper parts and then deteriorate the grain quality. As an adaptive strategy, in response to salt and HMs plants activated PM and VM localized MTs that export toxic elements into vacuole, and also translocate in the root’s tips and shoot. However, in case of drought, cold and heat stresses, MTs increased the water and sugar supply to all organs. In this review, we mainly reviewed recent literature from Arabidopsis, halophytes, and major field crops such as rice, wheat, maize and oilseed rape to argue on the global role of MTs in PG&D and abiotic stress tolerance. We also discussed the gene expression level changes and genomic variations within a species as well as within a family in response to developmental and environmental cues.


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