scholarly journals Interaction of Inherited Microbiota from Cover Crops with Cash Crops

Agronomy ◽  
2021 ◽  
Vol 11 (11) ◽  
pp. 2199
Author(s):  
Kelly Ulcuango ◽  
Mariela Navas ◽  
Nelly Centurión ◽  
Miguel Á. Ibañez ◽  
Chiquinquirá Hontoria ◽  
...  
Keyword(s):  
Community Structure ◽  
Cover Crops ◽  
Microbial Interactions ◽  
Legacy Effects ◽  
Soil Microbiota ◽  
Soil Microbial ◽  
Cash Crops ◽  
Microbial Responses ◽  
Subsequent Crop ◽  
Macro And Micronutrients

Cover crops (CC) provide important ecosystem services that are demanded to achieve more sustainable agrosystems. However, the legacy effects of CC on the microbial community structure and its interactions with the subsequent cash crops (CaC) are still poorly understood, especially when CC mixtures are involved. In this work, five CC (3 monocultures and 2 mixtures) were selected in an experiment under semi-controlled conditions to investigate if CC monocultures and mixtures differed in their effects on soil and crop variables and if the identity of the subsequent crop modulates these effects. The two most consumed crops worldwide, wheat and maize, were sown separately after CC. The legacy effects of CC on the studied microbial variables largely depended on the interaction with the CaC. The vetch and the barley-vetch mixture stood out by providing the microbial conditions that enhanced the absorption of macro- and micronutrients, to finally seek the highest wheat biomass (>80% more than the control). In maize, the effects of CC on soil microbiota were more limited. The soil microbial responses for CC mixtures were complex and contrasting. In wheat, the barley-vetch mixture behaved like barley monoculture, whereas in maize, this mixture behaved like vetch monoculture. In both CaC, the barley-melilotus mixture differed completely from its monocultures, mainly through changes in archaea, Glomeromycota, and F:B ratio. Therefore, it is necessary to deepen the knowledge on the CC-CaC-microbial interactions to select the CC that most enhance the sustainability and yield of each agrosystem.

scholarly journals Cover cropping can be a stronger determinant than host crop identity for arbuscular mycorrhizal fungal communities colonizing maize and soybean

PeerJ ◽  
2019 ◽  
Vol 7 ◽  
pp. e6403 ◽  
Author(s):  
Masao Higo ◽  
Yuya Tatewaki ◽  
Kento Gunji ◽  
Akari Kaseda ◽  
Katsunori Isobe
Keyword(s):  
Community Structure ◽  
Cover Crops ◽  
Cover Crop ◽  
Arbuscular Mycorrhizal ◽  
Crop Species ◽  
Cover Cropping ◽  
Cash Crops ◽  
Subsequent Crop ◽  
Soybean Roots ◽  
Amf Communities

BackgroundUnderstanding the role of communities of arbuscular mycorrhizal fungi (AMF) in agricultural systems is imperative for enhancing crop production. The key variables influencing change in AMF communities are the type of cover crop species or the type of subsequent host crop species. However, how maize and soybean performance is related to the diversity of AMF communities in cover cropping systems remains unclear. We therefore investigated which cover cropping or host identity is the most important factor in shaping AMF community structure in subsequent crop roots using an Illumina Miseq platform amplicon sequencing.MethodsIn this study, we established three cover crop systems (Italian ryegrass, hairy vetch, and brown mustard) or bare fallow prior to planting maize and soybean as cash crops. After cover cropping, we divided the cover crop experimental plots into two subsequent crop plots (maize and soybean) to understand which cover cropping or host crop identity is an important factor for determining the AMF communities and diversity both in maize and soybeans.ResultsWe found that most of the operational taxonomic units (OTUs) in root samples were common in both maize and soybean, and the proportion of common generalists in this experiment for maize and soybean roots was 79.5% according to the multinomial species classification method (CLAM test). The proportion of OTUs specifically detected in only maize and soybean was 9.6% and 10.8%, respectively. Additionally, the cover cropping noticeably altered the AMF community structure in the maize and soybean roots. However, the differentiation of AMF communities between maize and soybean was not significantly different.DiscussionOur results suggest cover cropping prior to planting maize and soybean may be a strong factor for shaping AMF community structure in subsequent maize and soybean roots rather than two host crop identities. Additionally, we could not determine the suitable rotational combination for cover crops and subsequent maize and soybean crops to improve the diversity of the AMF communities in their roots. However, our findings may have implications for understanding suitable rotational combinations between cover crops and subsequent cash crops and further research should investigate in-depth the benefit of AMF on cash crop performances in cover crop rotational systems.

Soil microbiota effects on rye growth: implications for integration of a rye cover crop into temperate cropping systems

2006 ◽  
Vol 21 (4) ◽  
pp. 245-252 ◽  
Author(s):  
Jason L. De Bruin ◽  
Nicholas R. Jordan ◽  
Paul M. Porter ◽  
Sheri C. Huerd
Keyword(s):  
Cover Crops ◽  
Mycorrhizal Fungi ◽  
Cropping Systems ◽  
Arbuscular Mycorrhizal ◽  
Microbial Populations ◽  
Shoot Biomass ◽  
Soil Microbiota ◽  
Soil Microbial ◽  
Growing Seasons ◽  
Final Harvest

AbstractIntegration of rye (Secale cereale L.) cover crops into the corn (Zea mays L.) soybean [(Glycine max (L.) Merr.] rotation of the upper Midwest USA can provide many agronomic and agroecological benefits. Integration is made difficult by short growing seasons, but may be facilitated by management of key agroecological interactions such as those between rye and soil microbiota. Rye growth was measured and colonization by arbuscular-mycorrhizal fungi (AMF) was determined in greenhouse experiments using soils from seven different management systems from a long-term cropping-systems experiment in southwest Minnesota. Microbial effects on rye growth were not evident before vernalization, but at final harvest (4 weeks after vernalization) soil microbial populations reduced rye shoot and root growth, relative to a pasteurized control inoculum. At final harvest, shoot biomass in 2-year rotations was 17% greater than 4-year rotations, indicating that microbial populations selected for by 4-year rotations may be more deleterious or pathogenic than those selected for by 2-year rotations. Growth of three rye cultivars was examined in all inocula; cultivars differed in their mean response to soil microbiota and their ability to host AMF. These findings suggest that management factors affect interactions between rye and soil microbiota resulting in altered rye growth.

scholarly journals Soil microbial functionality in response to the inclusion of cover crop mixtures in agricultural systems

2016 ◽  
Vol 14 (2) ◽  
pp. e0304 ◽  
Author(s):  
Diego N. Chavarría ◽  
Romina A. Verdenelli ◽  
Emiliano J. Muñoz ◽  
Cinthia Conforto ◽  
Silvina B. Restovich ◽  
...  
Keyword(s):  
Plant Species ◽  
Cover Crops ◽  
Control Treatment ◽  
Agricultural System ◽  
Agricultural Systems ◽  
Cash Crop ◽  
Soil Microbial ◽  
Catabolic Diversity ◽  
Cash Crops ◽  
Physiological Profiles

Agricultural systems where monoculture prevails are characterized by fertility losses and reduced contribution to ecosystem services. Including cover crops (CC) as part of an agricultural system is a promising choice in sustainable intensification of those demanding systems. We evaluated soil microbial functionality in cash crops in response to the inclusion of CC by analyzing soil microbial functions at two different periods of the agricultural year (cash crop harvest and CC desiccation) during 2013 and 2014. Three plant species were used as CC: oat (Avena sativa L.), vetch (Vicia sativa L.) and radish (Raphanus sativus L.) which were sown in two different mixtures of species: oat and radish mix (CC1) and oat, radish and vetch mix (CC2), with soybean monoculture and soybean/corn being the cash crops. The study of community level physiological profiles showed statistical differences in respiration of specific C sources indicating an improvement of catabolic diversity in CC treatments. Soil enzyme activities were also increased with the inclusion of CC mixtures, with values of dehydrogenase activity and fluorescein diacetate hydrolysis up to 38.1% and 35.3% higher than those of the control treatment, respectively. This research evidenced that CC inclusion promotes soil biological quality through a contribution of soil organic carbon, improving the sustainability of agrosystems. The use of a CC mixture of three plant species including the legume vetch increased soil biological processes and catabolic diversity, with no adverse effects on cash crop grain yield.

scholarly journals Soil Microbial Responses to 28 Years of Nutrient Fertilization in a Subarctic Heath

Ecosystems ◽  
2019 ◽  
Vol 23 (5) ◽  
pp. 1107-1119 ◽  
Author(s):  
Lettice C. Hicks ◽  
Kathrin Rousk ◽  
Riikka Rinnan ◽  
Johannes Rousk
Keyword(s):  
Community Structure ◽  
Soil Microorganisms ◽  
N Availability ◽  
Soil C ◽  
Soil Microbial ◽  
C And N Mineralization ◽  
Microbial Responses ◽  
Soil C And N ◽  
C And N

AbstractArctic and subarctic soils are typically characterized by low nitrogen (N) availability, suggesting N-limitation of plants and soil microorganisms. Climate warming will stimulate the decomposition of organic matter, resulting in an increase in soil nutrient availability. However, it remains unclear how soil microorganisms in N-limited soils will respond, as the direct effect of inorganic N addition is often shown to inhibit microbial activity, while elevated N availability may have a positive effect on microorganisms indirectly, due to a stimulation of plant productivity. Here we used soils from a long-term fertilization experiment in the Subarctic (28 years at the time of sampling) to investigate the net effects of chronic N-fertilization (100 kg N ha−1 y−1, added together with 26 kg P and 90 kg K ha−1 y−1, as expected secondary limiting nutrients for plants) on microbial growth, soil C and N mineralization, microbial biomass, and community structure. Despite high levels of long-term fertilization, which significantly increased primary production, we observed relatively minor effects on soil microbial activity. Bacterial growth exhibited the most pronounced response to long-term fertilization, with higher rates of growth in fertilized soils, whereas fungal growth remained unaffected. Rates of basal soil C and N mineralization were only marginally higher in fertilized soils, whereas fertilization had no significant effect on microbial biomass or microbial community structure. Overall, these findings suggest that microbial responses to long-term fertilization in these subarctic tundra soils were driven by an increased flow of labile plant-derived C due to stimulated plant productivity, rather than by direct fertilization effects on the microbial community or changes in soil physiochemistry.

scholarly journals Cover Crop Species Composition Alters the Soil Bacterial Community in a Continuous Pepper Cropping System

2022 ◽  
Vol 12 ◽  
Author(s):  
Huan Gao ◽  
Gangming Tian ◽  
Muhammad Khashi u Rahman ◽  
Fengzhi Wu
Keyword(s):  
Community Structure ◽  
Bacterial Community ◽  
Faba Bean ◽  
Cover Crops ◽  
Cover Crop ◽  
Soil Microbial Communities ◽  
Cropping System ◽  
Soil Physicochemical Properties ◽  
Soil Microbial ◽  
Wild Rocket

Cover crops can improve soil biological health and alter the composition of soil microbial communities in agricultural systems. However, the effects of diversified cover crops on soil microbial communities in continuous cropping systems are unclear. Here, using different soil biochemical analysis, quantitative PCR and 16S rRNA amplicon sequencing, we investigated the effects of cover crops, alone or in mixture, on soil physicochemical properties in 2019 and 2020, and soil bacterial communities in 2020 in a continuous pepper cropping system. A field trial was established before pepper planting and eight treatments were included: fallow (no cover crop; CK); three sole cover crop treatments: wheat (Triticum aestivum L.; W), faba bean (Vicia faba L.; B), and wild rocket (Diplotaxis tenuifolia; R); and four mixed treatments: wheat + wild rocket (WR), wheat + faba bean (WB), wild rocket + faba bean (RB), and wheat + wild rocket + faba bean (WRB). The pepper yield was increased in the WR and WB in 2019 and 2020, and in the WRB in 2020. Cover crops increased the soil pH, but decreased the concentrations of NH4+ and available phosphorus. Bacterial abundance was increased by cover crop treatments, and community structure was altered in the W, WB, and WRB treatments. Moreover, we found that pH was the key factor associated with the changes in the abundance and structure of the bacterial community. Cover crop treatments altered the bacterial community structure with shifts in the dominant genera, which have plant-growth-promoting and/or pathogen-antagonistic potentials, e.g., increased the abundances of Streptomyces, Arthrobacter, and Bacillus spp. in the W and WRB, and Gaiella spp. in the WB. Overall, we found that cover crops altered the soil physicochemical properties and bacterial community, and these changes varied with species composition of the cover crops, with wheat and its combination with legumes as most effective treatments. These results suggest that the diversification within cover crops could provide better crop yield stimulatory affects by altering soil biochemical environment.

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