scholarly journals Mapping Multiple Insect Outbreaks across Large Regions Annually Using Landsat Time Series Data

2020 ◽  
Vol 12 (10) ◽  
pp. 1655 ◽  
Author(s):  
Benjamin C. Bright ◽  
Andrew T. Hudak ◽  
Arjan J.H. Meddens ◽  
Joel M. Egan ◽  
Carl L. Jorgensen
Keyword(s):  
Time Series ◽  
High Resolution ◽  
Tree Mortality ◽  
Landsat Imagery ◽  
Total Mortality ◽  
Google Earth ◽  
Series Data ◽  
Tree Level ◽  
Insect Outbreaks ◽  
Forest Insect

Forest insect outbreaks have caused and will continue to cause extensive tree mortality worldwide, affecting ecosystem services provided by forests. Remote sensing is an effective tool for detecting and mapping tree mortality caused by forest insect outbreaks. In this study, we map insect-caused tree mortality across three coniferous forests in the Western United States for the years 1984 to 2018. First, we mapped mortality at the tree level using field observations and high-resolution multispectral imagery collected in 2010, 2011, and 2018. Using these high-resolution maps of tree mortality as reference images, we then classified moderate-resolution Landsat imagery as disturbed or undisturbed and for disturbed pixels, predicted percent tree mortality with random forest (RF) models. The classification approach and RF models were then applied to time series of Landsat imagery generated with Google Earth Engine (GEE) to create annual maps of percent tree mortality. We separated disturbed from undisturbed forest with overall accuracies of 74% to 80%. Cross-validated RF models explained 61% to 68% of the variation in percent tree mortality within disturbed 30-m pixels. Landsat-derived maps of tree mortality were comparable to vector aerial survey data for a variety of insect agents, in terms of spatial patterns of mortality and annual estimates of total mortality area. However, low-level tree mortality was not always detected. We conclude that our methodology has the potential to generate reasonable estimates of annual tree mortality across large extents.

scholarly journals Advancing the Mapping of Mangrove Forests at National-Scale Using Sentinel-1 and Sentinel-2 Time-Series Data with Google Earth Engine: A Case Study in China

2020 ◽  
Vol 12 (19) ◽  
pp. 3120
Author(s):  
Luojia Hu ◽  
Nan Xu ◽  
Jian Liang ◽  
Zhichao Li ◽  
Luzhen Chen ◽  
...  
Keyword(s):  
Time Series ◽  
High Resolution ◽  
Mangrove Forest ◽  
Time Series Data ◽  
Landsat Imagery ◽  
Google Earth ◽  
Series Data ◽  
National Scale ◽  
Google Earth Engine ◽  
Sentinel 2

A high resolution mangrove map (e.g., 10-m), including mangrove patches with small size, is urgently needed for mangrove protection and ecosystem function estimation, because more small mangrove patches have disappeared with influence of human disturbance and sea-level rise. However, recent national-scale mangrove forest maps are mainly derived from 30-m Landsat imagery, and their spatial resolution is relatively coarse to accurately characterize the extent of mangroves, especially those with small size. Now, Sentinel imagery with 10-m resolution provides an opportunity for generating high-resolution mangrove maps containing these small mangrove patches. Here, we used spectral/backscatter-temporal variability metrics (quantiles) derived from Sentinel-1 SAR (Synthetic Aperture Radar) and/or Sentinel-2 MSI (Multispectral Instrument) time-series imagery as input features of random forest to classify mangroves in China. We found that Sentinel-2 (F1-Score of 0.895) is more effective than Sentinel-1 (F1-score of 0.88) in mangrove extraction, and a combination of SAR and MSI imagery can get the best accuracy (F1-score of 0.94). The 10-m mangrove map was derived by combining SAR and MSI data, which identified 20003 ha mangroves in China, and the area of small mangrove patches (<1 ha) is 1741 ha, occupying 8.7% of the whole mangrove area. At the province level, Guangdong has the largest area (819 ha) of small mangrove patches, and in Fujian, the percentage of small mangrove patches is the highest (11.4%). A comparison with existing 30-m mangrove products showed noticeable disagreement, indicating the necessity for generating mangrove extent product with 10-m resolution. This study demonstrates the significant potential of using Sentinel-1 and Sentinel-2 images to produce an accurate and high-resolution mangrove forest map with Google Earth Engine (GEE). The mangrove forest map is expected to provide critical information to conservation managers, scientists, and other stakeholders in monitoring the dynamics of the mangrove forest.

An updated national-scale mangrove forest map in China Using Sentinel-1 and Sentinel-2 Time-Series Data with Google Earth Engine

2021 ◽  
Author(s):  
Luojia Hu ◽  
Wei Yao ◽  
Zhitong Yu ◽  
Yan Huang
Keyword(s):  
Time Series ◽  
High Resolution ◽  
Mangrove Forest ◽  
Google Earth ◽  
Series Data ◽  
National Scale ◽  
Mangrove Area ◽  
Google Earth Engine ◽  
Forest Maps ◽  
Sentinel 2

&lt;p&gt;A high resolution mangrove map (e.g., 10-m), which can identify mangrove patches with small size (&lt; 1 ha), is a central component to quantify ecosystem functions and help government take effective steps to protect mangroves, because the increasing small mangrove patches, due to artificial destruction and plantation of new mangrove trees, are vulnerable to climate change and sea level rise, and important for estimating mangrove habitat connectivity with adjacent coastal ecosystems as well as reducing the uncertainty of carbon storage estimation. However, latest national scale mangrove forest maps mainly derived from Landsat imagery with 30-m resolution are relatively coarse to accurately characterize the distribution of mangrove forests, especially those of small size (area &lt; 1 ha). Sentinel imagery with 10-m resolution provide the opportunity for identifying these small mangrove patches and generating high-resolution mangrove forest maps. Here, we used spectral/backscatter-temporal variability metrics (quantiles) derived from Sentinel-1 SAR (Synthetic Aperture Radar) and sentinel-2 MSI (Multispectral Instrument) time-series imagery as input features for random forest to classify mangroves in China. We found that Sentinel-2 imagery is more effective than Sentinel-1 in mangrove extraction, and a combination of SAR and MSI imagery can get a better accuracy (F1-score of 0.94) than using them separately (F1-score of 0.88 using Sentinel-1 only and 0.895 using Sentinel-2 only). The 10-m mangrove map derived by combining SAR and MSI data identified 20,003 ha mangroves in China and the areas of small mangrove patches (&lt; 1 ha) was 1741 ha, occupying 8.7% of the whole mangrove area. The largest area (819 ha) of small mangrove patches is located in Guangdong Province, and in Fujian the percentage of small mangrove patches in total mangrove area is the highest (11.4%). A comparison with existing 30-m mangrove products showed noticeable disagreement, indicating the necessity for generating mangrove extent product with 10-m resolution. This study demonstrates the significant potential of using Sentinel-1 and Sentinel-2 images to produce an accurate and high-resolution mangrove forest map with Google Earth Engine (GEE). The mangrove forest maps are expected to provide critical information to conservation managers, scientists, and other stakeholders in monitoring the dynamics of mangrove forest.&lt;/p&gt;

scholarly journals Mapping of Cotton Fields Within-Season Using Phenology-Based Metrics Derived from a Time Series of Landsat Imagery

2020 ◽  
Vol 12 (18) ◽  
pp. 3038
Author(s):  
Dhahi Al-Shammari ◽  
Ignacio Fuentes ◽  
Brett M. Whelan ◽  
Patrick Filippi ◽  
Thomas F. A. Bishop
Keyword(s):  
Time Series ◽  
Vegetation Index ◽  
Landsat Imagery ◽  
Google Earth ◽  
Growth Stages ◽  
Landsat 8 ◽  
Crop Type ◽  
Eastern Australia ◽  
Normalised Difference Vegetation Index ◽  
Cotton Fields

A phenology-based crop type mapping approach was carried out to map cotton fields throughout the cotton-growing areas of eastern Australia. The workflow was implemented in the Google Earth Engine (GEE) platform, as it is time efficient and does not require processing in multiple platforms to complete the classification steps. A time series of Normalised Difference Vegetation Index (NDVI) imagery were generated from Landsat 8 Surface Reflectance Tier 1 (L8SR) and processed using Fourier transformation. This was used to produce the harmonised-NDVI (H-NDVI) from the original NDVI, and then phase and amplitude values were generated from the H-NDVI to visualise active cotton in the targeted fields. Random Forest (RF) models were built to classify cotton at early, mid and late growth stages to assess the ability of the model to classify cotton as the season progresses, with phase, amplitude and other individual bands as predictors. Results obtained from leave-one-season-out cross validation (LOSOCV) indicated that Overall Accuracy (OA), Kappa, Producer’s Accuracies (PA) and User’s Accuracy (UA), increased significantly when adding amplitude and phase as predictor variables to the model, than prediction using H-NDVI or raw bands only. Commission and omission errors were reduced significantly as the season progressed and more in-season imagery was available. The methodology proposed in this study can map cotton crops accurately based on the reconstruction of the unique cotton reflectance trajectory through time. This study confirms the importance of phenological metrics in improving in-season cotton fields mapping across eastern Australia. This model can be used in conjunction with other datasets to forecast yield based on the mapped crop type for improved decision making related to supply chain logistics and seasonal outlooks for production.

scholarly journals Automatic Land-Cover Mapping using Landsat Time-Series Data based on Google Earth Engine

2019 ◽  
Vol 11 (24) ◽  
pp. 3023 ◽  
Author(s):  
Shuai Xie ◽  
Liangyun Liu ◽  
Xiao Zhang ◽  
Jiangning Yang ◽  
Xidong Chen ◽  
...  
Keyword(s):  
Time Series ◽  
Land Cover ◽  
Vegetation Index ◽  
Time Series Data ◽  
Land Cover Classification ◽  
Google Earth ◽  
Thematic Mapper ◽  
Series Data ◽  
Land Cover Mapping ◽  
Google Earth Engine

The Google Earth Engine (GEE) has emerged as an essential cloud-based platform for land-cover classification as it provides massive amounts of multi-source satellite data and high-performance computation service. This paper proposed an automatic land-cover classification method using time-series Landsat data on the GEE cloud-based platform. The Moderate Resolution Imaging Spectroradiometer (MODIS) land-cover products (MCD12Q1.006) with the International Geosphere–Biosphere Program (IGBP) classification scheme were used to provide accurate training samples using the rules of pixel filtering and spectral filtering, which resulted in an overall accuracy (OA) of 99.2%. Two types of spectral–temporal features (percentile composited features and median composited monthly features) generated from all available Landsat Thematic Mapper (TM) and Enhanced Thematic Mapper Plus (ETM+) data from the year 2010 ± 1 were used as input features to a Random Forest (RF) classifier for land-cover classification. The results showed that the monthly features outperformed the percentile features, giving an average OA of 80% against 77%. In addition, the monthly features composited using the median outperformed those composited using the maximum Normalized Difference Vegetation Index (NDVI) with an average OA of 80% against 78%. Therefore, the proposed method is able to generate accurate land-cover mapping automatically based on the GEE cloud-based platform, which is promising for regional and global land-cover mapping.

scholarly journals Reconstructing Three Decades of Land Use and Land Cover Changes in Brazilian Biomes with Landsat Archive and Earth Engine

2020 ◽  
Vol 12 (17) ◽  
pp. 2735 ◽  
Author(s):  
Carlos M. Souza ◽  
Julia Z. Shimbo ◽  
Marcos R. Rosa ◽  
Leandro L. Parente ◽  
Ane A. Alencar ◽  
...  
Keyword(s):  
Land Use ◽  
Time Series ◽  
Land Cover ◽  
Time Series Data ◽  
Google Earth ◽  
Series Data ◽  
Data Series ◽  
Forest Conversion ◽  
Pixel Resolution ◽  
Historical Land Use

Brazil has a monitoring system to track annual forest conversion in the Amazon and most recently to monitor the Cerrado biome. However, there is still a gap of annual land use and land cover (LULC) information in all Brazilian biomes in the country. Existing countrywide efforts to map land use and land cover lack regularly updates and high spatial resolution time-series data to better understand historical land use and land cover dynamics, and the subsequent impacts in the country biomes. In this study, we described a novel approach and the results achieved by a multi-disciplinary network called MapBiomas to reconstruct annual land use and land cover information between 1985 and 2017 for Brazil, based on random forest applied to Landsat archive using Google Earth Engine. We mapped five major classes: forest, non-forest natural formation, farming, non-vegetated areas, and water. These classes were broken into two sub-classification levels leading to the most comprehensive and detailed mapping for the country at a 30 m pixel resolution. The average overall accuracy of the land use and land cover time-series, based on a stratified random sample of 75,000 pixel locations, was 89% ranging from 73 to 95% in the biomes. The 33 years of LULC change data series revealed that Brazil lost 71 Mha of natural vegetation, mostly to cattle ranching and agriculture activities. Pasture expanded by 46% from 1985 to 2017, and agriculture by 172%, mostly replacing old pasture fields. We also identified that 86 Mha of the converted native vegetation was undergoing some level of regrowth. Several applications of the MapBiomas dataset are underway, suggesting that reconstructing historical land use and land cover change maps is useful for advancing the science and to guide social, economic and environmental policy decision-making processes in Brazil.

scholarly journals Missing data imputation of high‐resolution temporal climate time series data

2020 ◽  
Vol 27 (1) ◽  
Author(s):  
E Afrifa‐Yamoah ◽  
U. A. Mueller ◽  
S. M. Taylor ◽  
A. J. Fisher
Keyword(s):  
Time Series ◽  
Missing Data ◽  
High Resolution ◽  
Time Series Data ◽  
Series Data ◽  
Data Imputation ◽  
Missing Data Imputation ◽  
Climate Time Series

scholarly journals Assessing the Use of Sentinel-2 Time Series Data for Monitoring Cork Oak Decline in Portugal

2019 ◽  
Vol 11 (21) ◽  
pp. 2515 ◽  
Author(s):  
Ana Navarro ◽  
Joao Catalao ◽  
Joao Calvao
Keyword(s):  
Time Series ◽  
Vegetation Index ◽  
Normalized Difference Vegetation Index ◽  
Time Series Data ◽  
Temporal Dynamics ◽  
Cork Oak ◽  
Series Data ◽  
Tree Level ◽  
Oak Decline ◽  
Sentinel 2

In Portugal, cork oak (Quercus suber L.) stands cover 737 Mha, being the most predominant species of the montado agroforestry system, contributing to the economic, social and environmental development of the country. Cork oak decline is a known problem since the late years of the 19th century that has recently worsened. The causes of oak decline seem to be a result of slow and cumulative processes, although the role of each environmental factor is not yet established. The availability of Sentinel-2 high spatial and temporal resolution dense time series enables monitoring of gradual processes. These processes can be monitored using spectral vegetation indices (VI) as their temporal dynamics are expected to be related with green biomass and photosynthetic efficiency. The Normalized Difference Vegetation Index (NDVI) is sensitive to structural canopy changes, however it tends to saturate at moderate-to-dense canopies. Modified VI have been proposed to incorporate the reflectance in the red-edge spectral region, which is highly sensitive to chlorophyll content while largely unaffected by structural properties. In this research, in situ data on the location and vitality status of cork oak trees are used to assess the correlation between chlorophyll indices (CI) and NDVI time series trends and cork oak vitality at the tree level. Preliminary results seem to be promising since differences between healthy and unhealthy (diseased/dead) trees were observed.

Assessing and monitoring the vulnerability to drought and climate anomalies of Mediterranenan oak forests by using NDVI

2020 ◽  
Author(s):  
Maria Castellaneta ◽  
Angelo Rita ◽  
J. Julio Camarero ◽  
Michele Colangelo ◽  
Angelo Nolè ◽  
...  
Keyword(s):  
Remote Sensing ◽  
Time Series ◽  
Tree Mortality ◽  
Vegetation Index ◽  
Google Earth ◽  
Oak Forests ◽  
Summer Drought ◽  
Area Index ◽  
Ndvi Time Series ◽  
The Impact

&lt;p&gt;Several die-off episodes related to heat weaves and drought spells have evidenced the high vulnerability of Mediterranean oak forests. These events consisted in the loss in tree vitality and manifested as growths decline, elevated crown transparency (defoliation) and rising tree mortality rate. In this context, the changes in vegetation productivity and canopy greenness may represent valuable proxies to analyze how extreme climatic events trigger forest die-off. Such changes in vegetation status may be analyzed using remote-sensing data, specifically multi-temporal spectral information. For instance, the Normalized Difference Vegetation Index (NDVI) measures changes in vegetation greenness and is a proxy of changes in leaf area index (LAI), forest aboveground biomass and productivity. In this study, we analyzed the temporal patterns of vegetation in three Mediterranean oak forests showing recent die-off in response to the 2017 severe summer drought. For this purpose, we used an open-source platform (Google Earth Engine) to extract collections of MODIS NDVI time-series from 2000 to 2019. The analysis of both NDVI trends and anomalies were used to infer differential patterns of vegetation phenology among sites comparing plots where most trees were declining and showed high defoliation (test) versus plots were most trees were considered healthy (ctrl) and showed low or no defoliation. Here we discuss: i) the likely offset in NDVI time-series between test- versus ctrl- sites; and ii) the impact of summer droughts &amp;#160;on NDVI.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Keywords&lt;/strong&gt;: climate change, forest vulnerability, time series, remote sensing.&lt;/p&gt;

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