Sponge-Associated Amphipod Communities as Bioindicators for Pollution

<p>Pollution negatively impacts organisms across all marine ecosystems. Coastal areas are particularly vulnerable to pollution due to their proximity to human settlements. Amphipods are commonly used as bioindicators to monitor pollution burdens, due to their high sensitivities and their ubiquity. Pollution can reduce amphipod abundance, species richness, evenness and diversity. Community structure, proportionality of adults to juveniles and sex ratios may also be affected. Sponges often harbour high densities of amphipods, offering food, refuge and nurseries to their symbionts. Sponge-associated amphipods differ in their level of specialization on their host. This study provides first insights into the usefulness of sponge-associated amphipod communities as bioindicators. For this, it hypothesized that amphipod densities, species diversity, community structure, sex ratio and age proportionality will differ according to pollution levels. To test this, sponges were collected from three sites with varying degrees of pollution in Wellington Harbour. The sponges were weighed, and their volume was measured. They were dissected and their amphipods were identified to species level, counted, measured (length) and their sex and life cycle stage (adult or juvenile) were recorded. From this data, amphipod densities, species richness, evenness and Shannon-Wiener diversity indices were calculated and compared among pollution levels. Community structure was also compared between sites and sponge species. Pollution level significantly affected species richness, evenness, diversity and community structure. The highest values for species richness, evenness and diversity were found in sponges from the least polluted. The lowest levels of these factors were found in sponges from the most polluted site. Sponges from the intermediate site generally harboured moderate richness, evenness and diversity compared to the other sites. Community composition was significantly affected by pollution, although effect sizes differed between sponge species. Higher pollution levels seemed to favour dominance of species that are better adapted to living in sponges. Generalists seemed to thrive in low to intermediate pollution levels. The majority of sex ratios measured had a female bias, which appeared to increase with increasing pollution although the difference was not statistically significant. The proportion of adults also showed a non-significant increase with pollution level. There was no significant difference in amphipod abundance per litre of sponge tissue between pollution levels, possibly because pollution levels may have been too low to cause a reduction in amphipod density. These results show that sponge-associated amphipod communities are useful as bioindicators, as amphipod diversity, richness and evenness were significantly reduced by pollution and the sponge association allows for these community-scale comparisons to be made within an easily measurable framework. Species evenness in particular provided an accurate indication of different pollution levels.</p>

Sponge-Associated Amphipod Communities as Bioindicators for Pollution

<p>Pollution negatively impacts organisms across all marine ecosystems. Coastal areas are particularly vulnerable to pollution due to their proximity to human settlements. Amphipods are commonly used as bioindicators to monitor pollution burdens, due to their high sensitivities and their ubiquity. Pollution can reduce amphipod abundance, species richness, evenness and diversity. Community structure, proportionality of adults to juveniles and sex ratios may also be affected. Sponges often harbour high densities of amphipods, offering food, refuge and nurseries to their symbionts. Sponge-associated amphipods differ in their level of specialization on their host. This study provides first insights into the usefulness of sponge-associated amphipod communities as bioindicators. For this, it hypothesized that amphipod densities, species diversity, community structure, sex ratio and age proportionality will differ according to pollution levels. To test this, sponges were collected from three sites with varying degrees of pollution in Wellington Harbour. The sponges were weighed, and their volume was measured. They were dissected and their amphipods were identified to species level, counted, measured (length) and their sex and life cycle stage (adult or juvenile) were recorded. From this data, amphipod densities, species richness, evenness and Shannon-Wiener diversity indices were calculated and compared among pollution levels. Community structure was also compared between sites and sponge species. Pollution level significantly affected species richness, evenness, diversity and community structure. The highest values for species richness, evenness and diversity were found in sponges from the least polluted. The lowest levels of these factors were found in sponges from the most polluted site. Sponges from the intermediate site generally harboured moderate richness, evenness and diversity compared to the other sites. Community composition was significantly affected by pollution, although effect sizes differed between sponge species. Higher pollution levels seemed to favour dominance of species that are better adapted to living in sponges. Generalists seemed to thrive in low to intermediate pollution levels. The majority of sex ratios measured had a female bias, which appeared to increase with increasing pollution although the difference was not statistically significant. The proportion of adults also showed a non-significant increase with pollution level. There was no significant difference in amphipod abundance per litre of sponge tissue between pollution levels, possibly because pollution levels may have been too low to cause a reduction in amphipod density. These results show that sponge-associated amphipod communities are useful as bioindicators, as amphipod diversity, richness and evenness were significantly reduced by pollution and the sponge association allows for these community-scale comparisons to be made within an easily measurable framework. Species evenness in particular provided an accurate indication of different pollution levels.</p>

Sponge bioerosion and habitat degradation on Indonesian coral reefs

<p>Coral reefs are among the most diverse ecosystems on the planet, yet they are also sensitive to anthropogenic disturbances that can degrade these systems. On many degraded reefs, large increases in bioeroding sponge abundance have occurred. On healthy reefs these sponges contribute to species diversity and habitat complexity, however there is growing concern that their proliferation on degraded reefs could lead to a state of net-erosion. In the Southeast Asian Indo-Pacific, the ecology of bioeroding sponges in relation to coral degradation has been poorly studied compared to other coral reef regions. This thesis aims to increase our understanding of the ecology of these sponges in the Wakatobi region of Indonesia, and their likely trajectory if reefs continue to degrade in the region. My first research chapter aimed to identify the common bioeroding sponge species of the Wakatobi. This was achieved through in-water surveys, and subsequent spicule and phylogenetic analysis. This resulted in the identification of eight commonly occurring Wakatobi bioeroding sponge species, two of which are described for the first time. The assemblage composition was distinctly different from the only other bioeroding sponge study in Indonesian waters (Calcinai et al. 2005), highlighting the need for more clionaid taxonomic information from the region. Having identified the common bioeroding sponge species in the region, my second chapter assessed the major environmental drivers of the abundance and assemblage composition of these sponges. Abundance surveys were conducted at 11 reef sites characterised by different environmental conditions and states of reef health. Bioeroding sponges occupied 8.9% of suitable substrate, and differences in abundance and assemblage composition were primarily attributed to differences in the availability of dead substrate. However, abundance was lowest at a sedimented and turbid reef, despite abundant dead substrate availability. This indicates a limited resilience in some species to conditions associated with terrestrial run-off and that not all forms of reef degradation are beneficial for bioeroding sponges. The capacity to increase spatial occupation of degraded reefs is also dependent upon larval recruitment and my third chapter was a two year recruitment study using in situ experimental calcareous blocks. Recruitment occurred rapidly and consistently with bioeroding sponges recruiting to approximately 70% of experimental blocks and exhibiting a preference for settlement on uncolonised dead calcareous substrates. The importance of substrate settlement cues and extent of larval dispersal appeared to differ between species, indicative of different recruitment mechanisms. Any significant increase in the availability of exposed calcareous substrate (e.g. following a mass coral bleaching event) is therefore likely to result in widespread increases in bioeroding sponge recruitment. Surveys conducted in my second research chapter revealed that two of the three locally abundant zooxanthellate bioeroding species were absent from a highly turbid reef, Sampela. My fourth research chapter investigated whether this was due to light limitation by examining the photoacclimatory capabilities of the Symbiodinium photosymbionts of Cliona aff. viridis n. sp. A. PAM chlorophyll fluorometry was employed in a 25 day shading experiment and Symbiodinium of C. aff. viridis n. sp. A demonstrated an ability to photoacclimate to extreme light reduction and recover quickly when conditions returned to normal. My results demonstrate that the absence of this species at Sampela is not due to light limitation but possibly due to other stressors associated with turbidity, e.g. suspended sediment. My final chapter was an assessment of the environmental drivers of rates of bioerosion in Spheciospongia cf. vagabunda, a common species in the Wakatobi. Erosion rates were determined from changes in dry-weight of calcareous substrates with attached grafts of S. cf. vagabunda after a year deployment across seven reef sites. The average bioerosion rate was 12.0 kg m⁻² sponge tissue yr⁻¹ (± 0.87 SE), but differed between sites and was negatively correlated with settled sediment depth. Bioerosion by this species can play a significant part in the carbonate budget on reefs where it is abundant (up to 20% of available substrate on some reefs in the Wakatobi) but is likely reduced on highly sedimented reefs. In summary, the Wakatobi bioeroding sponge assemblage is diverse and overall, both adult abundance and recruitment are primarily driven by the availability of dead calcareous substrates. Therefore, further coral mortality and a subsequent rise in the availability of dead substrate in the region is likely to result in increased abundance of bioeroding sponges. However, not all forms of reef degradation will benefit these sponges; turbid and sedimented reefs will likely constitute stressful habitats for some bioeroding sponge species and assemblages in these environments will be comprised of fewer more resilient species.</p>

Sponge bioerosion and habitat degradation on Indonesian coral reefs

<p>Coral reefs are among the most diverse ecosystems on the planet, yet they are also sensitive to anthropogenic disturbances that can degrade these systems. On many degraded reefs, large increases in bioeroding sponge abundance have occurred. On healthy reefs these sponges contribute to species diversity and habitat complexity, however there is growing concern that their proliferation on degraded reefs could lead to a state of net-erosion. In the Southeast Asian Indo-Pacific, the ecology of bioeroding sponges in relation to coral degradation has been poorly studied compared to other coral reef regions. This thesis aims to increase our understanding of the ecology of these sponges in the Wakatobi region of Indonesia, and their likely trajectory if reefs continue to degrade in the region. My first research chapter aimed to identify the common bioeroding sponge species of the Wakatobi. This was achieved through in-water surveys, and subsequent spicule and phylogenetic analysis. This resulted in the identification of eight commonly occurring Wakatobi bioeroding sponge species, two of which are described for the first time. The assemblage composition was distinctly different from the only other bioeroding sponge study in Indonesian waters (Calcinai et al. 2005), highlighting the need for more clionaid taxonomic information from the region. Having identified the common bioeroding sponge species in the region, my second chapter assessed the major environmental drivers of the abundance and assemblage composition of these sponges. Abundance surveys were conducted at 11 reef sites characterised by different environmental conditions and states of reef health. Bioeroding sponges occupied 8.9% of suitable substrate, and differences in abundance and assemblage composition were primarily attributed to differences in the availability of dead substrate. However, abundance was lowest at a sedimented and turbid reef, despite abundant dead substrate availability. This indicates a limited resilience in some species to conditions associated with terrestrial run-off and that not all forms of reef degradation are beneficial for bioeroding sponges. The capacity to increase spatial occupation of degraded reefs is also dependent upon larval recruitment and my third chapter was a two year recruitment study using in situ experimental calcareous blocks. Recruitment occurred rapidly and consistently with bioeroding sponges recruiting to approximately 70% of experimental blocks and exhibiting a preference for settlement on uncolonised dead calcareous substrates. The importance of substrate settlement cues and extent of larval dispersal appeared to differ between species, indicative of different recruitment mechanisms. Any significant increase in the availability of exposed calcareous substrate (e.g. following a mass coral bleaching event) is therefore likely to result in widespread increases in bioeroding sponge recruitment. Surveys conducted in my second research chapter revealed that two of the three locally abundant zooxanthellate bioeroding species were absent from a highly turbid reef, Sampela. My fourth research chapter investigated whether this was due to light limitation by examining the photoacclimatory capabilities of the Symbiodinium photosymbionts of Cliona aff. viridis n. sp. A. PAM chlorophyll fluorometry was employed in a 25 day shading experiment and Symbiodinium of C. aff. viridis n. sp. A demonstrated an ability to photoacclimate to extreme light reduction and recover quickly when conditions returned to normal. My results demonstrate that the absence of this species at Sampela is not due to light limitation but possibly due to other stressors associated with turbidity, e.g. suspended sediment. My final chapter was an assessment of the environmental drivers of rates of bioerosion in Spheciospongia cf. vagabunda, a common species in the Wakatobi. Erosion rates were determined from changes in dry-weight of calcareous substrates with attached grafts of S. cf. vagabunda after a year deployment across seven reef sites. The average bioerosion rate was 12.0 kg m⁻² sponge tissue yr⁻¹ (± 0.87 SE), but differed between sites and was negatively correlated with settled sediment depth. Bioerosion by this species can play a significant part in the carbonate budget on reefs where it is abundant (up to 20% of available substrate on some reefs in the Wakatobi) but is likely reduced on highly sedimented reefs. In summary, the Wakatobi bioeroding sponge assemblage is diverse and overall, both adult abundance and recruitment are primarily driven by the availability of dead calcareous substrates. Therefore, further coral mortality and a subsequent rise in the availability of dead substrate in the region is likely to result in increased abundance of bioeroding sponges. However, not all forms of reef degradation will benefit these sponges; turbid and sedimented reefs will likely constitute stressful habitats for some bioeroding sponge species and assemblages in these environments will be comprised of fewer more resilient species.</p>

Snails associated with the coral-killing sponge Terpios hoshinota in Okinawa Island, Japan

Terpios hoshinota is a thin encrusting sponge that overgrows live scleractinian corals and it is linked to coral loss in many reefs. However, our knowledge of the species associated with this sponge species is poor. During a periodical survey of T. hoshinota in 2020, we found tiny snails crawling on the sponge in the subtropical waters around Okinawa Island, Japan. We observed egg capsules inside the sponge tissue and veliger larvae released from the egg capsules. Molecular analyses of both the snails and veliger larvae (cytochrome oxidase I, COI) showed that they were identical and belonged to Joculator sp. (family Cerithiopsidae). There was no direct observation of predation on the sponge by this snail; however, to the best of our knowledge, this is the first report on a close association between a snail and the sponge T. hoshinota.

Morphological and anatomical properties of Veronica crista-galli Steven

The aim of this work was to study of diagnostic signs of the morphological and anatomical structure of Veronica crista-galli Steven. from the flora of Azerbaijan. Materials and methods. The samples for research were collected during their flowering time in June 2018, in the Ismailli region of the Republic of Azerbaijan. Plant samples were fixed in a solution made in 0.1 M phosphate buffer (pH=7.4), containing 2.5 % glutar-aldehyde, 2.5 % paraformal-aldehyde and 0.1 % picric acid. In the next stage was the preparation of block and their filling in Araldite – Epon according to the TEM method. Results. The leaf is simple, lower part is short-petiolate and upper is sessile. The surface, on both sides of the leaf, is reliefly, and 7–8 conductive veins are clearly visible. The lower and upper sides of the leaf, and also margin, are strewn with multicellular hairs. The calyx of the flower consists of two sepals which grown together at the base, covered with simple multicellular hairs. The stalk in is a long filiform. The corolla of flower consists of 4 petals which grown together at the base and 2 stamens attached to the tube of the corolla. On the epidermis, cells with sinuous and bead-like walls, numerous stomata of the stavrocytic type, capitate hairs are visible. From the cross section of the leaf, it is visible that palisade tissue at the upper and sponge tissue at the bottom. Conclusions. As a result of morphological and anatomical studies, it was revealed that diagnostic signs of plant raw material can be: Present of multicellular hairs on the leaf blade; The location of the capsule between the sepals; Stavrocytic type of the stoma structure; The bead-like walls of the epidermis; Capitate hairs on the epidermis; Sepals covered by hairs. The established anatomical diagnostic features can be used for the drafting of the normative document on the plant raw materials and for identification of plant raw material of Veronica crista-galli

Massive cryptic microbe-sponge deposits in a Devonian fore-reef slope (Elbingerode Reef Complex, Harz Mts., Germany)

A massive occurrence of microbial carbonates, including abundant sponge remains, within the Devonian Elbingerode Reef Complex was likely deposited in a former cavity of the fore-reef slope during the early Frasnian. It is suggested that the formation of microbial carbonate was to a large part favored by the activity of heterotrophic, i.e., sulfate-reducing bacteria, in analogy to Quaternary coral reef microbialites. The Elbingerode Reef Complex is an example of an oceanic or Darwinian barrier reef system. In modern barrier reef settings, microbialite formation is commonly further facilitated by weathering products from the central volcanic islands. The Devonian microbialites of the Elbingerode Reef Complex occur in the form of reticulate and laminated frameworks. Reticulate framework is rich in hexactinellid glass sponges, the tissue decay of which led to the formation of abundant micrite as well as peloidal and stromatactis textures. Supposed calcimicrobes such as Angusticellularia (formerly Angulocellularia) and Frutexites, also known from cryptic habitats, were part of the microbial association. The microbial degradation of sponge tissue likely also contributed to the laminated framework accretion as evidenced by the occurrence of remains of so-called “keratose” demosponges. Further typical textures in the microbialite of the Elbingerode Reef Complex include zebra limestone, i.e., the more or less regular intercalation of microbial carbonate and cement. Elevated concentrations of magnesium in the microbialite as compared to the surrounding metazoan (stromatoporoid-coral) reef limestone suggests that the microbialite of the Elbingerode Reef Complex was initially rich in high-magnesium calcite, which would be yet another parallel to modern, cryptic coral reef microbial carbonates. Deposition and accretion of the microbialite largely occurred in oxygenated seawater with suboxic episodes as indicated by the trace element (REE + Y) data.

Plastics in Porifera: The occurrence of potential microplastics in marine sponges and seawater from Bocas del Toro, Panamá

Microplastics (MP) are now considered ubiquitous across global aquatic environments. The ingestion of MP by fish and other marine vertebrates is well studied, but the ingestion of MP by marine invertebrates is not. Sponges (Phylum Porifera) are particularly understudied when it comes to MP ingestion, even though they are widely distributed across benthic habitats, can process large volumes of seawater, and can retain small particles within their water filtration systems. This study examines the presence of potential MP (PMP) in wild marine sponges and seawater collected in Bocas del Toro, Panamá. Subsurface seawater and tissue from six common Caribbean sponge species was collected in Saigon Bay, a heavily impacted, shallow-water coral reef. Seawater samples were filtered onto glass fiber filters to retain any PMP present and sponge tissue was digested with bleach, heated and filtered. Filters were examined using fluorescence microscopy to quantify PMP. An average of 107 ± 25 PMP L–1 was detected in seawater from Saigon Bay with particles ranging in size between 10 μm and ~3,000 μm. The number of PMP found in sponge tissue ranged between 6 ± 4 and 169 ± 71 PMP g–1 of dry tissue. Most particles found in sponge samples were very small (10–20 μm), but fibers greater than 5,000 μm were detected. Our results indicate that PMP exists within the tissues of the sponges we studied, but future studies should confirm the presence of MP in sponges using chemical analysis. Most importantly, the discrepancy between low levels of PMP in our sponge samples and high levels in the surrounding seawater highlights the potential for sponges to resist and/or egest MP. Finally, we provide a critical evaluation of our methods to improve their use in future MP work with benthic marine organisms.

Assessing the Diversity and Biomedical Potential of Microbes Associated With the Neptune’s Cup Sponge, Cliona patera

Marine sponges are known to host a complex microbial consortium that is essential to the health and resilience of these benthic invertebrates. These sponge-associated microbes are also an important source of therapeutic agents. The Neptune’s Cup sponge, Cliona patera, once believed to be extinct, was rediscovered off the southern coast of Singapore in 2011. The chance discovery of this sponge presented an opportunity to characterize the prokaryotic community of C. patera. Sponge tissue samples were collected from the inner cup, outer cup and stem of C. patera for 16S rRNA amplicon sequencing. C. patera hosted 5,222 distinct OTUs, spanning 26 bacterial phyla, and 74 bacterial classes. The bacterial phylum Proteobacteria, particularly classes Gammaproteobacteria and Alphaproteobacteria, dominated the sponge microbiome. Interestingly, the prokaryotic community structure differed significantly between the cup and stem of C. patera, suggesting that within C. patera there are distinct microenvironments. Moreover, the cup of C. patera had lower diversity and evenness as compared to the stem. Quorum sensing inhibitory (QSI) activities of selected sponge-associated marine bacteria were evaluated and their organic extracts profiled using the MS-based molecular networking platform. Of the 110 distinct marine bacterial strains isolated from sponge samples using culture-dependent methods, about 30% showed quorum sensing inhibitory activity. Preliminary identification of selected QSI active bacterial strains revealed that they belong mostly to classes Alphaproteobacteria and Bacilli. Annotation of the MS/MS molecular networkings of these QSI active organic extracts revealed diverse classes of natural products, including aromatic polyketides, siderophores, pyrrolidine derivatives, indole alkaloids, diketopiperazines, and pyrone derivatives. Moreover, potential novel compounds were detected in several strains as revealed by unique molecular families present in the molecular networks. Further research is required to determine the temporal stability of the microbiome of the host sponge, as well as mining of associated bacteria for novel QS inhibitors.

A Deep-Sea Sponge Loop? Sponges Transfer Dissolved and Particulate Organic Carbon and Nitrogen to Associated Fauna

Cold-water coral reefs and sponge grounds are deep-sea biological hotspots, equivalent to shallow-water tropical coral reefs. In tropical ecosystems, biodiversity and productivity are maintained through efficient recycling pathways, such as the sponge loop. In this pathway, encrusting sponges recycle dissolved organic matter (DOM) into particulate detritus. Subsequently, the sponge-produced detritus serves as a food source for other organisms on the reef. Alternatively, the DOM stored in massive sponges was recently hypothesized to be transferred to higher trophic levels through predation of these sponges, instead of detritus production. However, for deep-sea sponges, the existence of all prerequisite, consecutive steps of the sponge loop have not yet been established. Here, we tested whether cold-water deep-sea sponges, similar to their tropical shallow-water counterparts, take up DOM and transfer assimilated DOM to associated fauna via either detritus production or predation. We traced the fate of 13carbon (C)- and 15nitrogen (N)-enriched DOM and particulate organic matter (POM) in time using a pulse-chase approach. During the 24-h pulse, the uptake of 13C/15N-enriched DOM and POM by two deep-sea sponge species, the massive species Geodia barretti and the encrusting species Hymedesmia sp., was assessed. During the subsequent 9-day chase in label-free seawater, we investigated the transfer of the consumed food by sponges into brittle stars via two possible scenarios: (1) the production and subsequent consumption of detrital waste or (2) direct feeding on sponge tissue. We found that particulate detritus released by both sponge species contained C from the previously consumed tracer DOM and POM, and, after 9-day exposure to the labeled sponges and detritus, enrichment of 13C and 15N was also detected in the tissue of the brittle stars. These results therefore provide the first evidence of all consecutive steps of a sponge loop pathway via deep-sea sponges. We cannot distinguish at present whether the deep-sea sponge loop is acting through a detrital or predatory pathway, but conclude that both scenarios are feasible. We conclude that sponges could play an important role in the recycling of DOM in the many deep-sea ecosystems where they are abundant, although in situ measurements are needed to confirm this hypothesis.