Transcriptome and Methylome Changes in Two Contrasting Mungbean Genotypes in Response to Drought Stress

Background: Due to drought stress, the growth, distribution, and production of mungbean is severely restricted. Previous study combining physiological and transcriptomic data indicated different genotypes of mungbean exhibited variable responses when exposed to drought stress. Aside from the genetic variation, the modifications of environmentally induced epigenetics alterations on mungbean drought-stress responses were still elusive. Results: In this study, firstly, we compared the drought tolerance capacity at seedling stages by detecting physiological parameters in two contrasting genotypes wild mungbean 61 and cultivar 70 in response to drought stress. We found that wild mungbean 61 showed lower level of MDA and higher levels of SOD, POD, and CAT, suggesting wild mungbean 61 exhibited stronger drought resistances. Transcriptomic analysis indicated totally 2659 differentially expressed genes (DEGs) were detected when 61 compared with 70 (C61 vs C70), and the number increased to 3121 in the comparison of drought-treated 70 compared with drought-treated 61 (D70 vs D61). In addition, when drought-treated 61 and 70 were compared with their controls, the DEGs were 1117 and 185 respectively, with more down-regulated DEGs than up-regulated in D61 vs C61, which was opposite in D70 vs C70. Interestingly, corresponding to this, after drought stress, more hypermethylated differentially methylated regions (DMRs) in 61 were detected and more hypomethylated DMRs in 70 were detected. Further analysis suggested that the main variations between 61 and 70 existed in CHH methylation in promoter. Moreover, the preference of methylation status alterations in D60 vs C60 and D70 vs C70 also fell in CHH sequence context. Further analysis of the correlation between DMRs and DEGs indicated in both D61 vs C61 and D70 vs C70, the DMRs in gene body was significantly negatively correlated with DEGs. Conclusion: The physiological parameters in this research suggested that wild mungbean 61 was more resistant to drought stress, with more hypermethylated DMRs and less hypomethylated DMRs after drought stress, corresponding to more down-regulated DEGs than up-regulated DEGs. Among the three DNA methylation contexts CG, CHG, and CHH, asymmetric CHH contexts were more dynamic and prone to be altered by drought stress and genotypic variations.

In vivo capture of bacterial cells by remote guiding

Recently, it has been shown that several bacterial strains can be very efficient in cancer treatment since they possess many important properties such as self-targeting, ease of detection, sensing and toxicity against tumors. However, there are only a few relevant candidates for such an approach, as targeting and detection one of the biggest challenges as well as there are many limitations in the use of genetic approaches. Here, it is proposed the solution that enables surface modification of alive bacterial cells without interfering with their genetic material and potentially reduces their toxic side effect. By the electrostatic interaction fluorescently labeled polyelectrolytes (PEs) and magnetite nanoparticles (NPs) were deposited on the bacterial cell surface to control the cell growth, distribution and detection of bacteria. According to the results obtained in vivo, by the magnet entrapment of the modified bacteria the local concentration of the cells was increased more than 5 times, keeping the high concentrations even when the magnet is removed. Since the PEs create a strong barrier, in vitro it was shown that the division time of the cells can be regulated for better immune presentation.

The multiscale nature of leaf growth fields

A growing leaf is a prototypical active solid, as its active units, the cells, locally deform during the out-of-equilibrium process of growth. During this local growth, leaves increase their area by orders of magnitude, yet maintain a proper shape, usually flat. How this is achieved in the lack of a central control, is unknown. Here we measure the in-plane growth tensor of Tobacco leaves and study the statistics of growth-rate, isotropy and directionality. We show that growth strongly fluctuates in time and position, and include multiple shrinkage events. We identify the characteristic scales of the fluctuations. We show that the area-growth distribution is broad and non-Gaussian, and use multiscale statistical methods to show how growth homogenizes at larger/longer scales. In contrast, we show that growth isotropy does not homogenize in time. Mechanical analysis shows that with such growth statistics, a leaf can stay flat only if the fluctuations are regulated/correlated.

Histology and Geochemistry of Allosaurus (Dinosauria: Theropoda) From the Cleveland-Lloyd Dinosaur Quarry (Late Jurassic, Utah): Paleobiological Implications

The Late Jurassic Allosaurus is one of the better-studied dinosaurs. A histological and geochemical study of a tibia and a femur of A. fragilis recovered in the Upper Jurassic Cleveland-Lloyd Dinosaur Quarry, Utah, United States has been done in order to address growth characteristics of this species. The two bones, probably belonging to separate individuals, are among the largest known for this species, which make them suitable to address such issues. The inclusion of our data on femur growth markings in the previously published data reflects a range of growth variability rather than two distinct growth strategies. The tibia has a well-developed external fundamental system indicating somatic maturity achievement. Using a quantitative method of superimposition to retrocalculate missing lines of arrested growth, the tibia appears to correspond to an individual that reached its skeletal maturity at 22 years and died at approximately 26 years. In the tibia, the concentration of zinc, a potential biomarker associated with bone formation, displays a higher concentration in zones of rapid growth compared to annuli. There is no direct relationship between the values of δ18Op and the lines of arrested growth distribution. The absence of relations between the histological organization and an enrichment in REE of the bone, indicates that the variations of δ18Op likely represent a diagenetic process rather than a primordial, biologic composition. However, the geochemical composition of the bones is not homogeneous along the sections, indicating that the signal variations have not been completely erased by diagenesis.