scholarly journals Mitochondrial Genome Resource of a grapevine strain of Trichoderma harzianum, a potential biological control agent for fungal canker diseases

Author(s):  
Christopher Wallis ◽  
Jianchi Chen ◽  
Adalberto A. Perez de Leon

Trichoderma spp. are commonly used as bioremediation agents, biological controls, and for making biofuels. Herein, a Trichoderma harzianum strain PAR3 was isolated from grapevine roots in central California, USA. As part of a larger whole genome sequencing effort, the mitochondrial genome (mitogenome) sequence was obtained for the PAR3 strain. The mitogenome is 27,631 bp containing genes of 14 core mitochondrial proteins, 25 tRNA, and two rRNAs and a GC% content of 27.55%. BLAST search using the PAR3 mitogenome as query against GenBank sequence database showed mitogenome MUT3171 (29,791 bp) of Trichoderma lixii was the most similar (Query Coverage = 99%; Percentage Identity=100.00%) with two major deletions, 1,339 bp and 821 bp. The PAR3 mitogenome sequence will provide a useful reference for comparing different Trichoderma strains from US and around the world.

2017 ◽  
Vol 16 (2) ◽  
pp. 115
Author(s):  
Johanna Taribuka ◽  
Christanti Sumardiyono ◽  
Siti Muslimah Widyastuti ◽  
Arif Wibowo

Exploration and identification of endophytic Trichoderma in banana. Endophytic fungi Trichoderma is an organism that can used as biocontrol agent. This study aims to isolate and identify endophytic Trichoderma in roots of healthy banana plants from three districts in Yogyakarta, which will be used as biological control agent against the pathogen Fusarium oxysporum f.sp. cubense. Isolation was conducted using TSM (Trichoderma Selective Medium). We obtained six isolates of endophytic Trichoderma spp., i.e., Swn-1, Swn-2, Ksn, Psr-1, Psr-2, and Psr-3. Molecular identification was done by using ITS1 and ITS2 primer pain and sequenced. The sequence of DNA obtained was analysed and compared with NCBI database by using BLAST-N programe. The results showed that all isolates were amplified at 560-bp. Phylogenetic analysis showed that isolates Swn-1, Swn-2 and Psr-1 are homologous to Trichoderma harzianum, isolate Ksn homologous to Trichoderma asperrellum, isolate Psr-2 homologous to Trichoderma gamsii, and isolate Psr-3 homologous to Trichoderma koningiopsis, with the homologous value of 99%.


2017 ◽  
Vol 114 ◽  
pp. 114-124 ◽  
Author(s):  
Daniel C. Burcham ◽  
Nelson V. Abarrientos ◽  
Jia Yih Wong ◽  
Mohamed Ismail Mohamed Ali ◽  
Yok King Fong ◽  
...  

2019 ◽  
Vol 3 (2) ◽  
pp. 202-212
Author(s):  
Rina Sriwati ◽  
Tjut Chamzhurni ◽  
Alfizar Alfizar ◽  
Bonny PW Soekarno ◽  
Vina Maulidia ◽  
...  

Molleculler study was conducted to identify several species of Trichoderma isolate from several  plant (Pine, Cacao, Gliceria, Nutmeg, Bamboo, Coffee, Potato).  The growth of eight species Trichodermaafter pelleting formulation has been observed. Pellet Trichoderma harzianum have good ability to growth on PDA medium after 4 weeks storage. Base on their mycelium diameter growth on PDA, T. harzianum have selected as potential species on pellet formulation growth.  Several dose of pellet formulation have been applied for controlling Phythopthora disease. The application of T. harzianum pellets in the form of a 2 g / 100 ml (S1) suspension effective in inhibiting the development of Phytophthora sp in cacao seedlings, when the higher concentrations of T. harzianum pellets applied to cacao seeds,the disease severity increase. Pellet Trichoderma could be use as biological control agent of cacao seedling in certain dosage.


2019 ◽  
Vol 4 (01) ◽  
pp. 18-21
Author(s):  
Ram Ji Lal ◽  
Rashmi Nigam ◽  
Joginder Singh

Sugarcane is one of the most important cash crops grown in India. Diseases cause deterioration in the juice quality of infected canes and reduce extraction of sugar. Among the various diseases reported from India, wilt is important disease in sugarcane. The disease is soil as well as sett borne in nature. In recent years, the use of bio-pesticides has gained attention in the management of diseases because of their non-hazardous nature, easily biodegradable and also do not cause bioaccumulation. Some of the most potent isolates of Trichoderma spp. identified from study were tested in lab as well as field condition for disease management of wilt. In a field experiment it was observed that the wilt incidence in the susceptible variety CoLk 97169 was considerably reduced and yield was enhanced in soil application of Trichoderma (20 kg TMC/ha) followed by sett dipping in Trichoderma spore suspension (106 spores/ml) before planting. Trichoderma can be multiplied either on FYM or press mud for its incorporation in sugarcane fields for the management of wilt disease.


Plant Disease ◽  
1998 ◽  
Vol 82 (11) ◽  
pp. 1210-1216 ◽  
Author(s):  
Chuanxue Hong ◽  
Themis J. Michailides ◽  
Brent A. Holtz

The effects of wounding, inoculum density, and three isolates (New, Ta291, and 23-E-6) of Trichoderma spp. and one isolate (BI-54) of Rhodotorula sp. on postharvest brown rot of stone fruits were determined at 20°C and 95% relative humidity (RH). Brown rot was observed frequently on wounded nectarine, peach, and plum fruits inoculated with two spores of Monilinia fructicola per wound, and occasionally on unwounded nectarine and peach fruits inoculated with the same spore load. Brown rot was observed on wounded plums only. A substantial increase in lesion diameter of brown rot was also recorded on wounded nectarines and peaches inoculated with suspensions of ≤20 spores and ≤200 spores per wound, respectively, compared with unwounded fruit. At concentrations of 107 and 108 spores per ml, all Trichoderma isolates substantially reduced brown rot on peaches (63 to 98%) and plums (67 to 100%) when fruits were inoculated with M. fructicola following the application of a biological control agent. Similarly, at 108 spores per ml, the yeast BI-54 also suppressed brown rot on peaches completely and on plums by 54%. Significant brown rot reduction was also achieved with the isolate New at a concentration of 108 spores per ml, even when the biocontrol agent was applied 12 h after inoculation with M. fructicola and under continuous conditions of 95% RH. The isolates Ta291 and 23-E-6 also reduced brown rot significantly under drier (50% RH) incubation conditions. These isolates provided the best control of brown rot on plums when they were applied 12 h earlier than inoculation with M. fructicola. Satisfactory control of brown rot on plums inoculated with M. fructicola at 8 × 104 spores per ml was achieved with New at 106 spores per ml and with Ta291 at 107 spores per ml. Measures taken to avoid injuring fruit will greatly reduce brown rot of stone fruit at any spore load for plum, but only at ≤50 spores per mm2 for peach, and at ≤5 spores per mm2 for nectarine. This study identifies two isolates (Ta291 and New) of Trichoderma atroviride, one isolate (23-E-6) of T. viride, and one of Rhodotorula sp. that show potential for further development as biocontrol agents of postharvest brown rot of stone fruits.


2001 ◽  
Vol 49 (4) ◽  
pp. 393-395 ◽  
Author(s):  
E. PAYGHAMI ◽  
S. MASSIHA ◽  
B. AHARY ◽  
M. VALIZADEH ◽  
A. MOTALLEBI

The effect of Trichoderma harzianum and Trichoderma viride (isolated from mycoflora in the rhizosphere of onion) in increasing the growth of onion was studied in a completely randomized design in pots with 12 replications under greenhouse conditions at 21°C with a 12-h light/dark cycle (fluorescent and incandescent lighting). The biological control of Sclerotium cepivorum Berk, the causal agent of white rot of onion, was also investigated in this experiment. The addition of Trichoderma spp. to autoclaved soil (inoculation of 2/3 of the top soil in the pots with 4% (v/v) inoculum of T. harzianum and T. viride) significantly increased the growth and fresh weight of the onion plants (P=1%). The biological control of S. cepivorum was achieved with T. harzianum and T. viride, but no significant difference was observed between the two species.


Mitochondrion ◽  
2016 ◽  
Vol 28 ◽  
pp. 67-72 ◽  
Author(s):  
Hao-Sen Li ◽  
Xin-Yu Liang ◽  
Shang-Jun Zou ◽  
Yang Liu ◽  
Patrick De Clercq ◽  
...  

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