scholarly journals What Can You Do with a TaxonWorks API?

2020 ◽  
Vol 4 ◽  
Author(s):  
Matthew Yoder ◽  
Hernán Pereira ◽  
José Luis Pereira ◽  
Dmitry Dmitriev ◽  
Geoffrey Ower ◽  
...  
Keyword(s):  
Cross Section ◽  
Application Programming Interface ◽  
Biodiversity Informatics ◽  
Web Based ◽  
Application Programming ◽  
Key Features ◽  
Programming Skills ◽  
Broad Cross Section ◽  
Programming Interface

TaxonWorks is a web-based workbench facilitating curation of a broad cross-section of biodiversity informatics concepts. Its development is currently led by the Species File Group. TaxonWorks has a large, JSON serving, application programming interface (API). This API is slowly being exposed for external use. The API is documented at https://api.taxonworks.org. Here we highlight some existing key features of the API focusing on the TaxonWorks concepts of People, Sources, Collection Objects, Taxon Names, and Downloads and provide a brief roadmap for upcoming additions. Highlights include the ability for data curators to produce shareable bibliographies, DarwinCore Archives (DwC-A), and Catalogue of Life-formatted datasets, access their nomenclature as autocompletes and via many filter facets, share Person metadata including numerous identifier types, and perform basic Geo-JSON and simple DwC-A parameter-based filtering on Collection Objects. As examples of what can be done with the API, we provide several visualizations that are straightforward to implement by those with basic R, Python, Javascript, or Ruby programming skills.

scholarly journals Tripal and Galaxy: supporting reproducible scientific workflows for community biological databases

Database ◽  
2020 ◽  
Vol 2020 ◽  
Author(s):  
Shawna Spoor ◽  
Connor Wytko ◽  
Brian Soto ◽  
Ming Chen ◽  
Abdullah Almsaeed ◽  
...  
Keyword(s):  
Workflow Management ◽  
Application Programming Interface ◽  
Scientific Workflow ◽  
Biological Databases ◽  
Web Based ◽  
Job Management ◽  
The Galaxy ◽  
Application Programming ◽  
Computational Resources ◽  
Programming Interface

Abstract Online biological databases housing genomics, genetic and breeding data can be constructed using the Tripal toolkit. Tripal is an open-source, internationally developed framework that implements FAIR data principles and is meant to ease the burden of constructing such websites for research communities. Use of a common, open framework improves the sustainability and manageability of such as site. Site developers can create extensions for their site and in turn share those extensions with others. One challenge that community databases often face is the need to provide tools for their users that analyze increasingly larger datasets using multiple software tools strung together in a scientific workflow on complicated computational resources. The Tripal Galaxy module, a ‘plug-in’ for Tripal, meets this need through integration of Tripal with the Galaxy Project workflow management system. Site developers can create workflows appropriate to the needs of their community using Galaxy and then share those for execution on their Tripal sites via automatically constructed, but configurable, web forms or using an application programming interface to power web-based analytical applications. The Tripal Galaxy module helps reduce duplication of effort by allowing site developers to spend time constructing workflows and building their applications rather than rebuilding infrastructure for job management of multi-step applications.

scholarly journals Peta Digital Demografi Penduduk Tingkat Desa Berbasis Web Menggunakan Google Maps API

2018 ◽  
Vol 9 (1) ◽  
pp. 33-41
Author(s):  
Fajri Profesio Putra ◽  
Danuri Danuri
Keyword(s):  
Information Disclosure ◽  
Application Programming Interface ◽  
Graphical Form ◽  
Web Based ◽  
Local Officials ◽  
Application Programming ◽  
The Government ◽  
Population Demographic ◽  
The Village ◽  
Programming Interface

Pemetaan demografi berbasis digital saat ini diperlukan dalam memudahkan masyarakat khususnya pejabat daerah dalam mengetahui sebaran populasi suatu wilayah. Peta demografi juga dapat menyajikan data statistik tentang tingkat pendidikan suatu wilayah, pekerjaan, usia, dan tanggungan keluarga. Saat ini untuk informasi demografi pada wilayah pemerintahan tingkat desa Kabupaten Bengkalis masih didata secara manual, sehingga untuk memperoleh informasi masyarakat harus mengakses data atau melihat data dikantor desa. Penelitian sistem demografi penduduk tingkat desa ini merupakan aplikasi berbasis web dimana untuk peta wilayah desa dintegrasikan dengan memanfaatkan fasilitas application programming interface (API). Pada sistem ditampilkan peta desa serta batas-batas wilayah untuk tingkat rt/rw dengan menentuka batas longitude dan latitude. Selanjutnya disediakan menu untuk administrator agar dapat menginputkan data-data kependudukan untuk selanjutnya ditampilkan dalam bentuk grafik. Adanya sistem ini dapat menghasilkan informasi yang berkualitas, terkini serta berguna untuk pengambil keputusan dalam menentukan kebijakan terhadap penduduk. Hal ini juga membantu pemerintah dalam membangun semangat untuk keterbukaan informasi.  Abstract Digital-based demographic mapping is currently required to facilitate the community, especially local officials in knowing the distribution of a region's population. Demographic maps can also provide statistical data about the educational level of a region, occupation, age, and family dependents. Currently, demographic information on the village level of Bengkalis Regency is still recorded manually, so to obtain information the community must access data or view data at the village office. This village population demography system research is a web-based application where the village area map is integrated by utilizing the application programming interface (API) facility. In the system is shown the map of the village as well as the boundaries of the region for rt / rw level by determining the limits of longitude and latitude. Further provided the menu for administrators in order to menginputkan data demography for the next displayed in graphical form. The existence of this system can produce quality information, current and useful for decision makers in determining the policy against the population. It also helps the government in building a passion for information disclosure.

scholarly journals Application Programming Interface (API) for Immunization Information Interoperability

2020 ◽  
Vol 8 (11) ◽  
Author(s):  
Noam Arzt
Keyword(s):  
Public Health ◽  
Application Programming Interface ◽  
Web Based ◽  
Public Health Agencies ◽  
Health Agencies ◽  
Standard Application ◽  
Application Programming ◽  
Programming Interfaces ◽  
Programming Interface ◽  
Effective Immunization

Public health agencies established immunization registries - now called Immunization Information Systems (IIS) - to consolidate records across provider locations to support more effective immunization of patients and public health surveillance. While initially collecting data through interactive client-server and then web-based interfaces, IIS now collect the vast majority of their data through automated interfaces to electronic health record (EHR) systems using standard application programming interfaces (API). IIS have sophisticated processing rules for the incoming data to ensure data accuracy and completeness. This paper will review the existing workflow, standards, and processes used by IIS to accept, process, and make immunization data available. This will include a review of emerging standards - Fast Healthcare Interoperability Resources (FHIR) - which will likely become dominant over the next few years.

scholarly journals Pengembangan Sistem Informasi Registrasi Mahasiswa Baru dengan Metode Analisis Gugus Kendali Mutu

2021 ◽  
Vol 10 (3) ◽  
pp. 191
Author(s):  
Santo Wijaya ◽  
Marta H.R.S.R. Sari ◽  
Adian Wihariono Putera
Keyword(s):  
Open Source ◽  
Application Programming Interface ◽  
Web Based ◽  
Application Programming ◽  
Programming Interface

Pendidikan sebagai industri produk dan jasa berbasis ilmu pengetahuan dan keterampilan menghadapi persaingan yang semakin kompetitif dengan banyaknya institusi baik dalam dan luar negeri yang operasional di Indonesia. Untuk meningkatkan daya saing, maka utilisasi teknologi informasi khususnya di era revolusi industri 4.0 menjadi kunci penting. Penelitian ini bertujuan untuk mengembangkan Sistem Informasi Registrasi Mahasiswa Baru (SIRMB) menggunakan kerangka open-source web-based application serta integrasinya dengan teknologi Application Programming Interface (API) Bank BNI menjadikan layanan administrasi yang terotomasi. Proses identifikasi masalah sampai perancangan solusi SIRMB menggunakan analisis gugus kendali mutu (QCC) dengan pendekatan metode Plan-Do-Check-Action (PDCA) sehingga menjamin perbaikan yang berkesinambungan. Penelitian ini berkontribusi terhadap perbaikan 76.9% terhadap proses kerja dengan eliminasi proses kerja manual registrasi mahasiswa baru, sehingga memberikan peningkatan kualitas layanan dan peningkatan produktivitas secara keseluruhan.

Web-Based Material Database for Material Selection and its Application Programming Interface (API) for CAD

2007 ◽  
Vol 345-346 ◽  
pp. 1593-1596 ◽  
Author(s):  
Doo Man Chun ◽  
Hyung Jung Kim ◽  
Jae Chul Lee ◽  
Sung Hoon Ahn
Keyword(s):  
Material Properties ◽  
Computer Aided Design ◽  
Material Selection ◽  
Application Programming Interface ◽  
Design Stage ◽  
Design Environment ◽  
Web Based ◽  
Application Programming ◽  
Programming Interface ◽  
The Web

Material selection became one of the important activities for engineers in design and manufacturing processes. A selected material at the beginning of design stage affects functionality of the designed part as well as manufacturability and cost of the final product. Unfortunately there are not many accessible material databases that can be properly used for design. In this research, a web-based material database was constructed. In order to assist designers to compare different materials, two-dimensional and three-dimensional graphs for comparison of material properties were provided via the web browser. Using these graphical tools, multi-dimensional comparison was available in more intuitive manner. In addition, this web site is open to the public, and one may add new material properties to the database in order to compare the data with existing materials. To provide the database in a commercial CAD (Computer Aided Design) environment, API (Application Programming Interface) modules were developed using Web services. The web-based material database can be accessible from http://fab.snu.ac.kr/matdb.

scholarly journals Quantifying the Growth of Preprint Services Hosted by the Center for Open Science

Publications ◽  
2019 ◽  
Vol 7 (2) ◽  
pp. 44 ◽  
Author(s):  
Tom Narock ◽  
Evan B. Goldstein
Keyword(s):  
English Language ◽  
Application Programming Interface ◽  
Open Science ◽  
Connected Components ◽  
Connected Component ◽  
Web Based ◽  
Open Access Journals ◽  
Wide Range ◽  
Application Programming ◽  
Programming Interface

A wide range of disciplines are building preprint services—web-based systems that enable publishing non peer-reviewed scholarly manuscripts before publication in a peer-reviewed journal. We have quantitatively surveyed nine of the largest English language preprint services offered by the Center for Open Science (COS) and available through an Application Programming Interface. All of the services we investigate also permit the submission of postprints, non-typeset versions of peer-reviewed manuscripts. Data indicates that all services are growing, but with submission rates below more mature services (e.g., bioRxiv). The trend of the preprint-to-postprint ratio for each service indicates that recent growth is a result of more preprint submissions. The nine COS services we investigate host papers that appear in a range of peer-reviewed journals, and many of these publication venues are not listed in the Directory of Open Access Journals. As a result, COS services function as open repositories for peer-reviewed papers that would otherwise be behind a paywall. We further analyze the coauthorship network for each COS service, which indicates that the services have many small connected components, and the largest connected component encompasses only a small percentage of total authors on each service. When comparing the papers submitted to each service, we observe topic overlap measured by keywords self-assigned to each manuscript, indicating that search functionalities would benefit from cutting across the boundaries of a single service. Finally, though annotation capabilities are integrated into all COS services, it is rarely used by readers. Our analysis of these services can be a benchmark for future studies of preprint service growth.

scholarly journals Web based Enhanced Interior Gateway Routing Protocol (EIGRP) on cisco router 2811 using cisco's Application Programming Interface (API)

Compiler ◽  
2021 ◽  
Vol 10 (2) ◽  
pp. 79
Author(s):  
Sudaryanto Sudaryanto ◽  
Anggraini Kusumaningrum ◽  
Yuliani Indrianingsih ◽  
Dadan Rachman Prabowo
Keyword(s):  
Programming Language ◽  
Routing Protocol ◽  
Application Programming Interface ◽  
Command Line ◽  
Device Management ◽  
Web Based ◽  
Interconnected Networks ◽  
Application Programming ◽  
Proprietary Protocol ◽  
Programming Interface

Enhanced Interior Gateway Routing Protocol (EIGRP) is a routing protocol that can be used to determine the path of data to be sent. EIGRP can achieve goals and study interconnected networks to obtain useful information to determine the best path. EIGRP is only adopted by Cisco routers or can be called a Cisco Proprietary Protocol, which can only be used on Cisco router devices. Currently, the EIGRP routing configuration uses the command line. For this reason, a Website-based EIGRP system was created and can be accessed remotely (remotely) with the aim of providing freedom of access and not focusing on one device. Website-based EIGRP system was created by utilizing Cisco's API as a liaison between the programming language and Cisco Router 2811 software. Telnet utilization plays a very important role in creating a Website-based EIGRP System where Telnet can provide wider access in management. By visiting the host and port of the router, the EIGRP Website Based System can easily do this. The results of the test in this study indicate that the Website-based EIGRP system is proven to be able to configure, so that administrators can use it for device management of Cisco Router 2811.

scholarly journals Design of IoT-based System for Smart Temporary Waste Shelter

2021 ◽  
Vol 17 (3) ◽  
Author(s):  
Muhammad Faza Izzaturrahman Nugroho ◽  
Istikmal Istikmal ◽  
Arif Indra Irawan
Keyword(s):  
Information System ◽  
Geographic Information System ◽  
Application Programming Interface ◽  
Geographic Information ◽  
End User ◽  
Web Based ◽  
Record Data ◽  
Application Programming ◽  
Arduino Microcontroller ◽  
Programming Interface

Internet of Things (IoT) is a concept where all products can interact with each other to help human activities by utilizing the internet. The IoT system can help solve problems such as the schedule-based retrieval system at a temporary shelter in Indonesia. This paper creates a web-based geographic information system along with the IoT-based waste temporary shelter prototype. The prototype also integrated with an Arduino Microcontroller so that it can sort the waste automatically into three types of waste, then record data in the form of height and weight, and send the results of the data to the database so that the geographic information system can display the results of the data. Node-RED serves as an Application Programming Interface (API) that sends data from the server to the database belonging to a web-based geographic information system. The results of the performance analysis are that the prototype has sorted waste well, and the system also produced good QoS by ETSI standards when looking at the network traffic from the MQTT server to the database, and from the end-user to the web. As for the QoE results for tools and systems have produced good results according to the ITU-T standard.

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