Comparison of Minimally Invasive Monitoring Methods and Live Trapping in Mammals

The conservation and management of wildlife requires the accurate assessment of wildlife population sizes. However, there is a lack of synthesis of research that compares methods used to estimate population size in the wild. Using a meta-analysis approach, we compared the number of detected individuals in a study made using live trapping and less invasive approaches, such as camera trapping and genetic identification. We scanned 668 papers related to these methods and identified data for 44 populations (all focused on mammals) wherein at least two methods (live trapping, camera trapping, genetic identification) were used. We used these data to quantify the difference in number of individuals detected using trapping and less invasive methods using a regression and used the residuals from each regression to evaluate potential drivers of these trends. We found that both trapping and less invasive methods (camera traps and genetic analyses) produced similar estimates overall, but less invasive methods tended to detect more individuals compared to trapping efforts (mean = 3.17 more individuals). We also found that the method by which camera data are analyzed can significantly alter estimates of population size, such that the inclusion of spatial information was related to larger population size estimates. Finally, we compared counts of individuals made using camera traps and genetic data and found that estimates were similar but that genetic approaches identified more individuals on average (mean = 9.07 individuals). Overall, our data suggest that all of the methods used in the studies we reviewed detected similar numbers of individuals. As live trapping can be more costly than less invasive methods and can pose more risk to animal well-fare, we suggest minimally invasive methods are preferable for population monitoring when less-invasive methods can be deployed efficiently.

Habitat type impacts small mammal diversity in the Ukaguru Mountains, Tanzania

We assessed the habitat association of the diversity and abundance of small mammals in the Ukaguru Mountains within the Eastern Arc Mountains, Tanzania. An estimation of the vegetation parameters and live-trapping of small mammals for three consecutive nights per month for 21 months were carried out in farmland, disturbed and intact forests. A total of 1196 individual small mammals comprising 13 species were captured. Species diversity and evenness in intact forest were much higher compared to disturbed forest. Principal component analysis (PCA) explained 87.7% of the variance with two factors. The study suggests vegetation and habitat disturbances are factors responsible for the observed diversity of small mammals in the Ukaguru Mountains. Mastomys natalensis, Mus triton and Praomys delectorum accounted for 90.0% of total captures. M. triton and M. natalensis were the most abundant in farmland with 46.8 and 42.8% of total captures respectively and associated with the herbaceous vegetation. P. delectorum correlated with litter depth and trees and accounted for 90.0 and 80.0% total captures in disturbed and intact forests respectively but the mean abundances in both habitats were not significantly different (p = 0.72).

Comparison of the efficiency and ethical implications of pitfall and Tomahawk traps on Virginia opposums (Didelphis virginiana)

The choice of methods for trapping animals can greatly affect the studies and their results, despite that there are relatively few studies on the matter. Thus, the purpose of this study is to compare two common methods of live trapping (Tomahawk traps and pitfall traps), their efficiency and ethical implications for trapping Virginia opossums (Didelphis virginiana). Traps were located in a paired design, the trapped animals were checked for sex, injuries caused by the trap and stress level, then marked and released in the same spot. At the same time, costs of both trap types were compared. Tomahawk traps were 60 % more efficient to trap opossums but the pitfall traps had better results in all the other categories: were more cost-effective, did not injure the animals as often and were less stressful. Neither type of trap presented bias in sex proportion or number of recaptured animals. In general, both types of traps resulted to be effective, the pitfall trap was the better option in almost all of the categories but has the disadvantage that in the infrequent event of two males being caught on in the same trap, they are likely to fight.

Does density-induced stress promote density-dependent reproduction in root voles? Two field experiments

Density dependence in reproduction plays an important role in stabilising population dynamics via immediate negative feedback from population density to reproductive output. Although previous studies have shown that density dependence is associated with strong spacing behaviour and social interaction between individuals, the proximal mechanism for generating density-dependent reproduction remains unclear. In this study, we investigated the effects of density-induced stress on reproduction in root voles. Founder population enclosures were established by introducing six (low density) and 30 (high density) adults per sex into per enclosure (four enclosures per density in total) during the breeding season from April to July 2012 and from May to August 2015. Faecal corticosterone metabolite (FCM) levels, reproductive traits (recruitment and the proportion of reproductive condition), and founder population numbers were measured following repeated live-trapping in both years. The number of founders was negatively associated with recruitment rates and the proportion of reproductive conditions, displaying a density-dependent reproduction. FCM level was positively associated with the number of founders. The number of founder females indirectly affected the proportion of reproductive females in 2012 and recruitment in 2015 through their FCM levels; the effect of the number of male founders on the proportion of reproductive condition was mediated by their FCM level in 2012, but the effect was not found in 2015. Our results showed that density-induced stress affected density-dependent reproduction and that density-induced stress is one ecological factor generating density-dependent reproduction.

Effects of parasites and predators on nociception: decreases analgesia reduces overwinter survival in root voles (Rodentia: Cricetidae)

Growing evidence suggests that parasite-infected prey is more vulnerable to predation. However, the mechanism underlying this phenomenon is obscure. In small mammals, analgesia induced by environmental stressors is a fundamental component of the defensive repertoire, promoting defensive responses. Thus, the reduced analgesia may impair the defensive ability of prey and increase their predation risk. This study aimed to determine whether coccidia infection increases the vulnerability to predation in root voles, Microtus oeconomus (Pallas, 1776), by decreased analgesia. Herein, a predator stimulus and parasitic infection were simulated in the laboratory via a two-level factorial experiment, then, the vole nociceptive responses to an aversive thermal stimulus were evaluated. Further, a field experiment was performed to determine the overwinter survival of voles with different nociceptive responses via repeated live trapping. The coccidia-infected voles demonstrated reduced predator-induced analgesia following exposure to predator odor. Meanwhile, pain-sensitive voles had lower overwinter survival than pain-inhibited voles in enclosed populations throughout the duration of the experiment. Our findings suggest that coccidia infection attenuates predator-induced analgesia, resulting in an increased vulnerability to predation.

Conservation of endangered Tipton kangaroo rats (Dipodomys nitratoides nitratoides): status surveys, habitat suitability, and conservation recommendations

The Tipton kangaroo rat (Dipodomys nitratoides nitratoides; TKR) is listed as endangered both Federally and by the state of California due to profound habitat loss throughout its range in the southern San Joaquin Valley of California. Habitat loss is still occurring and critical needs for TKR include identifying occupied sites, quantifying optimal habitat conditions, and conserving habitat. Our objectives were to (1) conduct surveys to identify sites where TKR were extant, (2) assess habitat attributes on all survey sites, (3) generate a GIS-based model of TKR habitat suitability, (4) use the model to determine the quantity and quality of remaining TKR habitat, and (5) use these results to develop conservation recommendations. We surveyed for TKR on 44 sites by live-trapping and detected TKR on 15 sites. Sites with TKR tended to have larger alkali scalds and no obvious sign of past tilling compared to sites without TKR. Also, sites with TKR usually had relatively sparse ground cover and seepweed (Suaeda nigra) was present. The non-protected Heermann’s kangaroo rat (Dipodomys heermanni), a larger competitor, was either absent or present in relatively low numbers at sites with TKR, and when present its abundance was inversely related to that of TKR. Based on our habitat suitability modeling, an estimated 30,000 ha of moderately high or high quality TKR habitat and 60,000 ha of lower or medium quality habitat remain. However, habitat is still being lost and conversion of at least one survey site with TKR occurred during this project. Recommendations for TKR conservation are to (1) conduct additional TKR surveys on unsurveyed but suitable sites, (2) conserve suitable habitat on unprotected lands, (3) manage vegetation on occupied sites if necessary, (4) restore disturbed lands to increase suitability for TKR, and (5) research methods and conduct translocations of TKR to unoccupied sites with suitable habitat.

Demography of the enigmatic low phase in a cyclic lemming population

Deciphering the mechanism behind the lack of growth during the prolonged low abundance phase of cyclic populations represents a major challenge due to the lack of data. However, long-term capture-mark-recapture datasets can help resolve this question through demographic analyses. We analysed the demography and movements of cyclic brown lemmings on Bylot Island, Canada, with a 16-yr (2004-2019) live-trapping program and looked for inversely density-dependent factors that could contribute to a prolonged low phase. We found that the proportion of females in the population was inversely density-dependent with a strong male-biased sex ratio at low densities but not at high densities. In contrast, survival of adult females was higher than adult males, but both had lower survival at low densities than at high ones. Distances moved by both adult males and females were density-dependent, and proportion of females in reproductive condition was weakly density-dependent. Individual body condition, measured as monthly change in body mass, was not density-dependent. Overall, the strong malebiased sex ratio at very low densities suggests a loss of reproductive potential due to the rarity of females and appears to be the most susceptible demographic factor that could contribute to the prolonged low phase in cyclic brown lemmings. What leads to this sexbias in the first place is still unclear, but indirect evidence suggests that this may be due to a higher vulnerability of nesting females to predation in winter than males.

Fur loss syndrome and lice infestations observed on arctic foxes in central Nunavut, Canada.

As temperatures in the circumpolar north continue to warm, shifts in species distribution and the breakdown of environmental barriers for arthropods may impact the diversity and distribution of ectoparasites in Arctic ecosystems. In May 2019, fur loss over the neck and shoulders was observed on arctic foxes in a terrestrial arctic ecosystem (Karrak Lake) in central Nunavut, Canada. This was inconsistent with normal patterns of shedding winter fur and had not been observed on arctic foxes in this population over the previous 19 years of live-trapping. Operculated eggs attached to hair shafts were collected from one affected fox. Conventional PCR using universal louse primers targeting conserved regions of mitochondrial 12S and 16S rDNA confirmed that the eggs belonged to the order Phthiraptera. Sequencing results were inconclusive at the species level. Further investigation revealed a single unpublished report of an arctic fox with similar fur loss trapped on mainland Nunavut, in 1997. Adult lice collected from this fox were identified as sucking lice (potentially from the genus Linognathus). Our findings emphasize the need for further monitoring and have significant implications for trappers and wildlife management, as infestations negatively impact the pelt quality of these important furbearers.

Evaluating Live trapping and Camera-based Indices of Small Mammal Density

Density estimates are integral to wildlife management, but they can be costly to obtain. Indices of density may provide efficient alternatives, but calibration is needed to ensure the indices accurately reflect density. We evaluated several indices of small mammal density using live trapping and motion-activated cameras in Washington’s Cascade Mountains. We used linear regression to compare spatially-explicit capture recapture density estimates of mice, voles, and chipmunks to four indices. Two indices were based on live trapping (minimum number alive and number of captures per 100 trap nights) and two indices were based on photos from motion-activated cameras (proportion of cameras detecting a species and the number of independent detections). We evaluated how the accuracy of trap-based indices increased with trapping effort using subsets of the full dataset (n = 7 capture occasions per site). Most indices provided reliable indicators of small mammal density, and live trapping indices (R2=0.64 – 0.98) outperformed camera-based indices (R2=0.24 – 0.86). All indices performed better for more abundant species. The effort required to estimate each index varied, and indices that required more effort performed better. These findings should help managers, conservation practitioners, and researchers select small mammal monitoring methods that best fit their needs.

Low levels of faecal cortisol in bank voles (Myodes glareolus) in response to live-trapping

Small mammal trapping is a commonly taught field technique in ecology and population biology. However, there are still open questions regarding the extent to which trapping affects the welfare of small animals. This study investigated faecal cortisol as a non-invasive measurement of the physiological stress response of bank voles (Myodes glareolus) to live-trapping. Faecal cortisol concentrations were similar between samples collected from trapped and non-trapped voles, but were negatively correlated with capture duration. This result may suggest that any physiological stress response was short-lasting and the animals habituated to the trap. As such, effects on faecal cortisol were not apparent as mean faecal cortisol concentration was determined from multiple collected faeces. Future work should focus on characterising the potential stress response to trapping with greater temporal resolution.